Education, Science, Technology, Innovation and Life
Open Access
Sign In

Bioinformatics Analysis of the Expression and Clinical Significance of MMPs in Lung Adenocarcinoma

Download as PDF

DOI: 10.23977/medbm.2025.030101 | Downloads: 16 | Views: 236

Author(s)

Yinsong Hu 1,2, Haitao Jiao 3, Jinyan Zhao 1

Affiliation(s)

1 College of Basic Medicine, Chengde Medical University, Chengde, Hebei, China
2 Bioinformatics Research Lab, Chengde Medical University, Chengde, Hebei, China
3 Clinical Skills Teaching Center, Chengde Medical University, Chengde, Hebei, China

Corresponding Author

Jinyan Zhao

ABSTRACT

This study uses bioinformatics methods to analyze the expression and clinical significance of human MMP gene family (MMPs) in lung adenocarcinoma (LUAD). The GSE115002 dataset from the GEO database is downloaded to analyze the expression of MMPs. The chromosomal localization of differentially expressed MMPs is determined. Kaplan-Meier Plotter is used to analyze the relationship between MMPs’ expression and the overall survival (OS) and disease-free survival (DFS) of LUAD patients. As a result, we found that the expression levels of MMP1, MMP3, MMP7, MMP9, MMP10, MMP11, MMP12 and MMP13 show marked elevation in tumor tissues. MMP-11 is located in the q36.3 segment of human chromosome 7, while MMP-9 is situated in the q13.12 segment of human chromosome 20. Other MMPs are primarily localized in the q22.2 region of human chromosome 11. Elevated expression of MMP1, MMP3, MMP7, MMP10, MMP11 and MMP12 is significantly associated with poor prognosis in LUAD patients. To conclude, the expression levels of MMP1, MMP3, MMP7, MMP10, MMP11 and MMP12 are significantly upregulated in LUAD. They are expected to become biomarkers for LUAD prognosis.

KEYWORDS

Bioinformatics; MMPs; LUAD; Prognosis

CITE THIS PAPER

Yinsong Hu, Haitao Jiao, Jinyan Zhao, Bioinformatics Analysis of the Expression and Clinical Significance of MMPs in Lung Adenocarcinoma. MEDS Basic Medicine (2025) Vol. 3: 1-5. DOI: http://dx.doi.org/10.23977/medbm.2025.030101.

REFERENCES

[1] F. Bray, M. Laversanne, H. Sung, J. Ferlay, R. L. Siegel, I. Soerjomataram, et al. Global cancer statistics 2022: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries. CA Cancer J Clin, 2024, 74(3): 229-263. 
[2] W. D. Travis, E. Brambilla, A. G. Nicholson, Y. Yatabe, J. H. M. Austin, M. B. Beasley, et al. The 2015 World Health Organization Classification of Lung Tumors: Impact of Genetic, Clinical and Radiologic Advances Since the 2004 Classification. J Thorac Oncol, 2015, 10(9): 1243-1260.
[3] P. Li, X. Chen, S. Zhou, X. Xia, E. Wang, R. Han, et al. High Expression of DEPDC1B Predicts Poor Prognosis in Lung Adenocarcinoma. J Inflamm Res, 2022, 15: 4171-4184.
[4] R. Han, Y. Guan, M. Tang, M. Li, B. Zhang, G. Fei, et al. High Expression of PSRC1 Predicts Poor Prognosis in Lung Adenocarcinoma. J Cancer, 2023, 14(17): 3321-3334.
[5] Y. Liu, T. Han, J. Wu, J. Zhou, J. Guo, R. Miao, et al. SPOCK1, as a potential prognostic and therapeutic biomarker for lung adenocarcinoma, is associated with epithelial-mesenchymal transition and immune evasion. J Transl Med, 2023, 21(1): 909.
[6] B. Gajewska, M. Śliwińska-Mossoń. Association of MMP-2 and MMP-9 Polymorphisms with Diabetes and Pathogenesis of Diabetic Complications. Int J Mol Sci, 2022, 23(18).
[7] A. Hilliard, P. Mendonca, T. D. Russell, K. F. A. Soliman. The Protective Effects of Flavonoids in Cataract Formation through the Activation of Nrf2 and the Inhibition of MMP-9. Nutrients, 2020, 12(12).
[8] S. R. Van Doren. MMP-7 marks severe pancreatic cancer and alters tumor cell signaling by proteolytic release of ectodomains. Biochem Soc Trans, 2022, 50(2): 839-851.
[9] S. Niland, A. X. Riscanevo, J. A. Eble. Matrix Metalloproteinases Shape the Tumor Microenvironment in Cancer Progression. Int J Mol Sci, 2021, 23(1).
[10] A. Kowalczyk, M. K. Nisiewicz, M. Bamburowicz-Klimkowska, A. Kasprzak, M. Ruzycka-Ayoush, M. Koszytkowska-Stawińska, et al. Effective voltammetric tool for simultaneous detection of MMP-1, MMP-2, and MMP-9; important non-small cell lung cancer biomarkers. Biosens Bioelectron, 2023, 229: 115212.
[11] K. Kessenbrock, V. Plaks, Z. Werb. Matrix metalloproteinases: regulators of the tumor microenvironment. Cell, 2010, 141(1): 52-67.
[12] O. Nyormoi, L. Mills, M. Bar-Eli. An MMP-2/MMP-9 inhibitor, 5a, enhances apoptosis induced by ligands of the TNF receptor superfamily in cancer cells. Cell Death Differ, 2003, 10(5): 558-569.
[13] Z. C. Wang, F. Q. Shen, M. R. Yang, L. X. You, L. Z. Chen, H. L. Zhu, et al. Dihydropyrazothiazole derivatives as potential MMP-2/MMP-8 inhibitors for cancer therapy. Bioorg Med Chem Lett, 2018, 28(23-24): 3816-3821.
[14] N. Senn, M. Ott, J. Lanz, R. Riedl. Targeted Polypharmacology: Discovery of a Highly Potent Non-Hydroxamate Dual Matrix Metalloproteinase (MMP)-10/-13 Inhibitor. J Med Chem, 2017, 60(23): 9585-9598.
[15] W. Zhou, X. Yu, S. Sun, X. Zhang, W. Yang, J. Zhang, et al. Increased expression of MMP-2 and MMP-9 indicates poor prognosis in glioma recurrence. Biomed Pharmacother, 2019, 118: 109369.
[16] Y. Jin, Z. Y. Liang, W. X. Zhou, L. Zhou. An MMP-based risk score strongly distinguishes prognosis in hepatocellular carcinoma after resection. Future Oncol, 2022, 18(26): 2903-2917.
[17] C. Böckelman, I. Beilmann-Lehtonen, T. Kaprio, S. Koskensalo, T. Tervahartiala, H. Mustonen, et al. Serum MMP-8 and TIMP-1 predict prognosis in colorectal cancer. BMC Cancer, 2018, 18(1): 679.
[18] W. Wattanawongdon, T. S. Bartpho, T. Tongtawee. Expression of Matrix Metalloproteinase-7 Predicts Poor Prognosis in Gastric Cancer. Biomed Res Int, 2022, 2022: 2300979.
[19] Y. Z. Wang, K. P. Wu, A. B. Wu, Z. C. Yang, J. M. Li, Y. L. Mo, et al. MMP-14 overexpression correlates with poor prognosis in non-small cell lung cancer. Tumour Biol, 2014, 35(10): 9815-9821.

Downloads: 1282
Visits: 54660

Sponsors, Associates, and Links


All published work is licensed under a Creative Commons Attribution 4.0 International License.

Copyright © 2016 - 2031 Clausius Scientific Press Inc. All Rights Reserved.